6NOS
PD-L1 IgV domain V76T with fragment
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-11-28 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 2 |
格子定数 [Å] | 84.014, 97.401, 33.182 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 29.421 - 2.701 |
R因子 | 0.1944 |
Rwork | 0.185 |
R-free | 0.27540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1i8l |
結合長の平均二乗偏差(RMSD) [Å] | 0.010 |
結合角の平均二乗偏差(RMSD) [度] | 1.415 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 40.000 | 2.750 |
分解能 [Å] (高) | 2.700 | 2.700 |
Rmerge_l_obs | 0.129 | 0.469 |
Rmeas | 0.146 | 0.566 |
Rpim | 0.066 | 0.309 |
独立反射数 | 7548 | 354 |
<I/σ(I)> | 7.2 | |
完全性 [%] | 94.2 | 89.6 |
冗長性 | 4.1 | 2.6 |
CC(1/2) | 0.079 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | EVAPORATION | 291 | 0.056 M sodium phosphate monobasic, 1.344 M potassium phosphate dibasic |