6IV8
the selenomethionine(SeMet)-derived Cas13d binary complex
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-05-16 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 21 |
格子定数 [Å] | 65.164, 145.733, 249.383 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 62.920 - 2.150 |
R因子 | 0.1898 |
Rwork | 0.189 |
R-free | 0.21030 |
Structure solution method | SAD |
結合長の平均二乗偏差(RMSD) [Å] | 0.013 |
結合角の平均二乗偏差(RMSD) [度] | 1.781 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | AutoSol |
Refinement software | REFMAC (5.8.0222) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 62.920 | 2.190 |
分解能 [Å] (高) | 2.150 | 2.150 |
Rmerge_l_obs | 0.129 | |
Rpim | 0.053 | 0.337 |
独立反射数 | 129626 | 6409 |
<I/σ(I)> | 14.5 | |
完全性 [%] | 99.7 | 100 |
冗長性 | 13.3 | |
CC(1/2) | 0.998 | 0.939 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | (0.5% (w/v) Tryptone, 0.1 M HEPES sodium (pH 7.0), 16% (w/v) Polyethylene glycol 3350) |