6EK4
PaxB from Photorhabdus luminescens
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-12-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
格子定数 [Å] | 104.590, 70.180, 136.890 |
格子定数 [度] | 90.00, 108.41, 90.00 |
精密化法
残基 | 15.000 - 2.800 |
R因子 | 0.24205 |
Rwork | 0.240 |
R-free | 0.26835 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Semet derivative of PaxB |
結合長の平均二乗偏差(RMSD) [Å] | 0.004 |
結合角の平均二乗偏差(RMSD) [度] | 0.696 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 30.000 | 2.900 |
分解能 [Å] (高) | 2.800 | 2.800 |
Rmeas | 0.069 | 0.515 |
独立反射数 | 44675 | |
<I/σ(I)> | 9.7 | 1.8 |
完全性 [%] | 95.3 | 94.7 |
冗長性 | 2.9 | |
CC(1/2) | 0.997 | 0.729 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 293 | 0.2 M MgCl2; 0.1 M Bis-Tris, 25% PEG 3350; 0.2M NaSCN |