6EER
Structure of glycine-bound GoxA from Pseudoalteromonas luteoviolacea
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-06 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
格子定数 [Å] | 110.242, 93.464, 187.903 |
格子定数 [度] | 90.00, 95.02, 90.00 |
精密化法
残基 | 48.295 - 1.820 |
R因子 | 0.1774 |
Rwork | 0.175 |
R-free | 0.21270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6byw |
結合長の平均二乗偏差(RMSD) [Å] | 0.006 |
結合角の平均二乗偏差(RMSD) [度] | 0.885 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 48.300 | 1.850 |
分解能 [Å] (高) | 1.820 | 1.820 |
Rmerge_l_obs | 0.068 | 0.405 |
Rpim | 0.062 | 0.365 |
独立反射数 | 338105 | 16759 |
<I/σ(I)> | 10 | |
完全性 [%] | 99.5 | 99.9 |
冗長性 | 3.7 | 3.4 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | BATCH MODE | 7.5 | 292 | 22% w/v PEG 3350, 0.1 M ammonium sulfate, 0.1 M HEPES pH 7.5 mixed 1:1 with protein at 10 mg/mL |