6DO2
Crystal structure of human GRP78 in complex with 7-deaza-2'-C-methyladenosine
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-16 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.62 - 2.5 |
Spacegroup name | P 1 21 1 |
格子定数 [Å] | 55.410, 75.020, 89.480 |
格子定数 [度] | 90.00, 99.11, 90.00 |
精密化法
残基 | 24.890 - 1.700 |
R因子 | 0.208 |
Rwork | 0.207 |
R-free | 0.23200 |
Data reduction software | XDS |
Phasing software | BUSTER |
Refinement software | BUSTER (2.10.2) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 50.000 | 1.800 |
分解能 [Å] (高) | 1.700 | 1.700 |
独立反射数 | 79463 | |
<I/σ(I)> | 15.72 | |
完全性 [%] | 99.3 | |
冗長性 | 4.45 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 24 to 26% PEG 3350, 0.1 M Tris-HCl and 0.2 M NaCl (by microseeding with the initial crystals from 0.1 M Tris- HCl pH 8.5, 25% PEG 3350 and 0.1 M Na/K tartrate) |