5YNI
Crystal structure of MERS-CoV nsp16/nsp10 complex bound to SAM and m7GpppG
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-03 |
Detector | DECTRIS PILATUS3 R CdTe 300K |
Wavelength(s) | 0.9778 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 66.954, 70.064, 119.762 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.406 - 2.070 |
R-factor | 0.1961 |
Rwork | 0.194 |
R-free | 0.23740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3r24 |
RMSD bond length | 0.005 |
RMSD bond angle | 1.204 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.500 | |
High resolution limit [Å] | 2.070 | 2.070 |
Rmerge | 0.108 | |
Rmeas | 0.112 | |
Rpim | 0.031 | |
Number of reflections | 71386 | 3493 |
<I/σ(I)> | 15.4 | 3.4 |
Completeness [%] | 99.9 | 99.4 |
Redundancy | 12.9 | 12 |
CC(1/2) | 0.998 | 0.952 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 290 | 10% PEG 5000 ME, 5% Tascimate, pH7.0 |