5MAF
Crystal structure of MELK in complex with an inhibitor
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-04 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.976254 |
Spacegroup name | P 21 21 21 |
格子定数 [Å] | 59.913, 63.713, 91.292 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 52.250 - 2.800 |
R因子 | 0.21207 |
Rwork | 0.210 |
R-free | 0.25919 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | In house MELK structure |
結合長の平均二乗偏差(RMSD) [Å] | 0.007 |
結合角の平均二乗偏差(RMSD) [度] | 1.204 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0151) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 52.250 | 2.950 |
分解能 [Å] (高) | 2.800 | 2.800 |
Rmerge_l_obs | 0.129 | 0.733 |
独立反射数 | 9059 | |
<I/σ(I)> | 9.8 | 2.6 |
完全性 [%] | 99.8 | 99.8 |
冗長性 | 6 | 6.2 |
CC(1/2) | 0.993 | 0.774 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 10-20% PEG 3350 or PEG 4000, 0.1 M BIS TRIS pH 6.5, 0.6M NaCl |