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5IM4

Crystal structure of designed two-component self-assembling icosahedral cage I52-32

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2015-07-18
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97920
Spacegroup nameH 3
Unit cell lengths258.820, 258.820, 641.730
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution110.724 - 3.500
R-factor0.2275
Rwork0.227
R-free0.23340
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Rosetta design generated based on the PDB files 2jfb and 3lfh but with differences
RMSD bond length0.008
RMSD bond angle1.071
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER (2.5.6)
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]213.900213.9003.590
High resolution limit [Å]3.50015.6503.500
Rmerge0.1320.0590.674
Number of reflections200420
<I/σ(I)>7.3118.961.9
Completeness [%]99.196.597.5
Redundancy3.6
CC(1/2)0.991
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP82980.17 M potassium sodium tartrate tetrahydrate

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