4Y1U
Complex of human Galectin-1 and Galbeta1-4GlcNAc
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13C1 |
Synchrotron site | NSRRC |
Beamline | BL13C1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-12-14 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97622 |
Spacegroup name | P 21 21 21 |
格子定数 [Å] | 43.300, 58.234, 111.649 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 23.615 - 1.762 |
R因子 | 0.1848 |
Rwork | 0.182 |
R-free | 0.22740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1w6n |
結合長の平均二乗偏差(RMSD) [Å] | 0.014 |
結合角の平均二乗偏差(RMSD) [度] | 1.480 |
Data scaling software | HKL-2000 |
Phasing software | PHASER (2.5.3) |
Refinement software | PHENIX |
Quality characteristics
Overall | Inner shell | Outer shell | |
分解能 [Å] (低) | 30.000 | 30.000 | 1.820 |
分解能 [Å] (高) | 1.760 | 3.790 | 1.760 |
Rmerge_l_obs | 0.044 | 0.025 | 0.242 |
Rmeas | 0.048 | 0.028 | 0.266 |
Rpim | 0.020 | 0.012 | 0.109 |
Total number of observations | 167642 | ||
独立反射数 | 28643 | ||
<I/σ(I)> | 18 | ||
完全性 [%] | 99.8 | 99.3 | 99.4 |
冗長性 | 5.9 | 5.5 | 5.7 |
CC(1/2) | 0.999 | 0.983 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 0.1 M Tris (pH 8.0), 0.2 M Li2SO4, 30% (w/v) PEG 3350 |