4OMF
The F420-reducing [NiFe]-hydrogenase complex from Methanothermobacter marburgensis, the first X-ray structure of a group 3 family member
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-05-05 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.0, 1.71 |
Spacegroup name | F 2 3 |
格子定数 [Å] | 233.160, 233.160, 233.160 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 19.990 - 1.710 |
R因子 | 0.152 |
Rwork | 0.150 |
R-free | 0.18100 |
Structure solution method | cryo-EM model of FrhABG complex and calculated SAD phases were combined |
結合長の平均二乗偏差(RMSD) [Å] | 0.011 |
結合角の平均二乗偏差(RMSD) [度] | 1.317 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | SHARP |
Refinement software | PHENIX ((phenix.refine: 1.8.4_1496)) |
Quality characteristics
Overall | |
分解能 [Å] (低) | 50.000 |
分解能 [Å] (高) | 1.700 |
独立反射数 | 112689 |
完全性 [%] | 86.1 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 281 | 17-20 % PEE797, 100 mM MES/NaOH, 400 mM MgCl2, 5% glycerol, 100 mM trimethylamine oxide, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 281.0K |