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3ZE3

Crystal structure of the integral membrane diacylglycerol kinase - delta7

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]100
Detector technologyCCD
Collection date2012-06-13
DetectorMARRESEARCH
Wavelength(s)1.03320, 0.97944
Spacegroup nameP 21 21 21
Unit cell lengths75.060, 91.540, 143.650
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution51.894 - 2.050
R-factor0.1969
Rwork0.196
R-free0.21670
Structure solution methodSAD
Starting model (for MR)NONE
RMSD bond length0.003
RMSD bond angle0.536
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareSHELX (CDE)
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]58.0402.160
High resolution limit [Å]2.0502.050
Rmerge0.1100.850
Number of reflections62716
<I/σ(I)>12.42
Completeness [%]99.799.5
Redundancy9.36.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIPIDIC CUBIC PHASE5.62773-5 %(V/V) 2-METHYL-2, 4-PENTANEDIOL, 0.1 M SODIUM CHLORIDE, 0.06 M MAGNESIUM ACETATE, 0.1 M SODIUM CITRATE/HCL PH 5.6. CRYSTALLIZED USING THE IN MESO (LIPIDIC CUBIC PHASE) METHOD AT 4 DEGREE CELSIUS WITH THE 7.8 MONOACYLGLYCEROL (7.8 MAG) AS THE HOSTING LIPID.

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數據於2024-04-10公開中

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