3RIG
Sirt5 is an NAD-dependent protein lysine demalonylase and desuccinylase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE A1 |
Synchrotron site | CHESS |
Beamline | A1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-12-09 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.917 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.538, 67.876, 156.749 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.000 |
R-factor | 0.221 |
Rwork | 0.219 |
R-free | 0.25600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2b4y |
RMSD bond length | 0.020 |
RMSD bond angle | 1.856 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.980 |
High resolution limit [Å] | 1.950 | 5.290 | 1.950 |
Rmerge | 0.090 | 0.071 | 0.346 |
Number of reflections | 41492 | ||
<I/σ(I)> | 9.6 | ||
Completeness [%] | 99.9 | 97.9 | 99.7 |
Redundancy | 6.8 | 5.3 | 5.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9.5 | 298 | 20% PEG 8000, 0.1M CHES, pH 9.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |