3ON3
The crystal structure of keto/oxoacid ferredoxin oxidoreductase, gamma subunit from Geobacter sulfurreducens PCA
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-06-07 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97926 |
Spacegroup name | P 3 2 1 |
格子定数 [Å] | 91.332, 91.332, 74.191 |
格子定数 [度] | 90.00, 90.00, 120.00 |
精密化法
残基 | 39.548 - 2.193 |
R因子 | 0.1988 |
Rwork | 0.196 |
R-free | 0.26010 |
Structure solution method | SAD |
結合長の平均二乗偏差(RMSD) [Å] | 0.007 |
結合角の平均二乗偏差(RMSD) [度] | 1.022 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | SHELXD |
Refinement software | PHENIX ((phenix.refine: 1.5_2)) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 40.000 | 2.240 |
分解能 [Å] (高) | 2.193 | 2.200 |
Rmerge_l_obs | 0.155 | 0.827 |
独立反射数 | 18254 | |
<I/σ(I)> | 20.6 | 1.5 |
完全性 [%] | 98.0 | 85.7 |
冗長性 | 9.2 | 7.8 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 289 | 0.2M sodium chloride, 0.1M Sodium cacodylate, 2M Ammonium sulfate, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K |