Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3LDU

The crystal structure of a possible methylase from Clostridium difficile 630.

Experimental procedure
実験手法SINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2009-10-20
DetectorADSC QUANTUM 315
Wavelength(s)0.97929
Spacegroup nameP 1 21 1
格子定数 [Å]42.059, 74.047, 64.061
格子定数 [度]90.00, 104.15, 90.00
精密化法
残基23.795 - 1.700
R因子0.1742
Rwork0.172
R-free0.21050
Structure solution methodSAD
結合長の平均二乗偏差(RMSD) [Å]0.007
結合角の平均二乗偏差(RMSD) [度]1.062
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareSHELXD
Refinement softwarePHENIX ((phenix.refine: 1.5_2))
Quality characteristics
 OverallOuter shell
分解能 [Å] (低)23.8001.730
分解能 [Å] (高)1.7001.700
Rmerge_l_obs0.0690.807
独立反射数41197
<I/σ(I)>35.91.88
完全性 [%]98.498.1
冗長性54.6
結晶化条件
結晶ID方法pH温度溶液条件
1VAPOR DIFFUSION, SITTING DROP6.52890.1M MES, 15% PEG 400, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K

217705

件を2024-03-27に公開中

PDB statisticsPDBj update infoContact PDBjnumon