3KGG
X-ray structure of perdeuterated diisopropyl fluorophosphatase (DFPase): Perdeuteration of proteins for neutron diffraction
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 298 |
Detector technology | CCD |
Collection date | 2007-07-01 |
Detector | RIGAKU SATURN 92 |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 21 |
格子定数 [Å] | 43.140, 83.150, 87.440 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 500.000 - 2.100 |
R因子 | 0.1764 |
Rwork | 0.176 |
R-free | 0.21750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2GVW.pdb |
結合長の平均二乗偏差(RMSD) [Å] | 0.006 |
結合角の平均二乗偏差(RMSD) [度] | 1.431 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | CNS |
Refinement software | CNS |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 500.000 | 2.210 |
分解能 [Å] (高) | 2.100 | 2.100 |
Rmerge_l_obs | 0.577 | |
独立反射数 | 18978 | |
<I/σ(I)> | 2.9 | |
完全性 [%] | 99.8 | 100 |
冗長性 | 3.4 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 11 % PEG 6000, RT, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K |