3D8C
Factor inhibiting HIF-1 alpha D201G mutant in complex with ZN(II), alpha-ketoglutarate and HIF-1 alpha 19mer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-04-19 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.96960 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 86.427, 86.427, 148.065 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.650 - 2.100 |
R-factor | 0.218 |
Rwork | 0.218 |
R-free | 0.25600 |
Structure solution method | ISOMORPHOUS WITH 1H2N |
Starting model (for MR) | 1h2n |
RMSD bond length | 0.011 |
RMSD bond angle | 1.300 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS (1.1) |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.180 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.101 | 0.743 |
Number of reflections | 33850 | |
<I/σ(I)> | 23.18 | 3.66 |
Completeness [%] | 99.7 | 98.7 |
Redundancy | 13.9 | 13.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 1.6M AMMONIUM SULPHATE, 6% PEG400, 0.1M HEPES PH7.5, 24MG/ML PROTEIN WITH 1MM FE(II)SO4, 1MM ALPHA-KETOGLUTARATE, 1MM HIF-1ALPHA PEPTIDE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298.0K, PH 7.50 |