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2P5Y

Crystal structure of Thermus thermophilus HB8 UDP-glucose 4-epimerase complex with NAD

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-BM
Synchrotron siteAPS
Beamline22-BM
Temperature [K]100
Detector technologyCCD
Collection date2007-03-01
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.97928
Spacegroup nameP 41 3 2
Unit cell lengths135.667, 135.667, 135.667
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 1.920
R-factor0.192
Rwork0.191
R-free0.20700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2p5u
RMSD bond length0.011
RMSD bond angle1.282
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareEPMR
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.990
High resolution limit [Å]1.9204.1401.920
Rmerge0.0460.312
Number of reflections33164
<I/σ(I)>15.2
Completeness [%]100.099.9100
Redundancy42.438.441.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.6293USING 1 MICROLITER DROPS CONTAINING EQUAL VOLUMES OF PROTEIN CONCENTRATE (11.71 mg/ml) AND RESERVOIR SOLUTION CONTAINING 1.0M Magnesium sulfate, 0.1M Sodium citrate, pH 5.6, VAPOR DIFFUSION, SITTING DROP, temperature 293K

217705

數據於2024-03-27公開中

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