1VDC
STRUCTURE OF NADPH DEPENDENT THIOREDOXIN REDUCTASE
Experimental procedure
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG |
Synchrotron site | EMBL/DESY, HAMBURG |
Temperature [K] | 175 |
Detector technology | IMAGE PLATE |
Collection date | 1995-07 |
Detector | RIGAKU |
Spacegroup name | P 41 21 2 |
格子定数 [Å] | 89.974, 89.974, 175.626 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 20.000 - 2.500 |
R因子 | 0.188 |
Rwork | 0.188 |
R-free | 0.24300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1trb |
結合長の平均二乗偏差(RMSD) [Å] | 0.012 |
結合角の平均二乗偏差(RMSD) [度] | 1.800 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | X-PLOR (3.1) |
Refinement software | X-PLOR (3.1) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 20.000 | 2.540 |
分解能 [Å] (高) | 2.500 | 2.500 |
Rmerge_l_obs | 0.085 | 0.487 |
Total number of observations | 139995 * | |
独立反射数 | 20556 * | |
<I/σ(I)> | 7.7 | |
完全性 [%] | 100.0 | 100 |
冗長性 | 6.81 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | Vapor diffusion, hanging drop * | 7% ISOPROPANOL (OR 4% MPD) AND 1.8 M AMMONIUM SULFATE |
文献の結晶化試薬
ID | 結晶ID | 溶液 | 試薬名 | 濃度 (単位) (単位) | 詳細 |
1 | 1 | reservoir | isopropanol | 7 (%(v/v)) | or 4 % MPD |
2 | 1 | reservoir | ammonium sulfate | 1.8 (M) |