1SO8
Abeta-bound human ABAD structure [also known as 3-hydroxyacyl-CoA dehydrogenase type II (Type II HADH), Endoplasmic reticulum-associated amyloid beta-peptide binding protein (ERAB)]
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 32-ID |
Synchrotron site | APS |
Beamline | 32-ID |
Temperature [K] | 100 |
Spacegroup name | P 4 3 2 |
格子定数 [Å] | 130.000, 130.000, 130.000 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 29.830 - 2.300 |
R因子 | 0.231 |
Rwork | 0.231 |
R-free | 0.26100 |
Structure solution method | MOLECULAR REPLACEMENT |
結合長の平均二乗偏差(RMSD) [Å] | 0.006 |
結合角の平均二乗偏差(RMSD) [度] | 1.100 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | GLRF |
Refinement software | CNS (1.1) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 30.000 | |
分解能 [Å] (高) | 2.300 | 2.300 |
Rmerge_l_obs | 0.051 | 0.152 |
独立反射数 | 17049 | |
<I/σ(I)> | 57.7 | 13 |
完全性 [%] | 99.8 | 99.8 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 295 | Abeta, MES, NaCl, DTT, NAD, benzamidine, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K |