1QJ9
CRYSTAL STRUCTURE OF THE OUTER MEMBRANE PROTEIN OMPX FROM ESCHERICHIA COLI
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X11 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X11 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1998-04-15 |
Detector | MARRESEARCH |
Spacegroup name | H 3 2 |
格子定数 [Å] | 82.300, 82.300, 208.100 |
格子定数 [度] | 90.00, 90.00, 120.00 |
精密化法
残基 | 35.000 - 2.100 |
R因子 | 0.233 * |
Rwork | 0.233 |
R-free | 0.28400 |
Structure solution method | MIR |
結合長の平均二乗偏差(RMSD) [Å] | 0.021 |
結合角の平均二乗偏差(RMSD) [度] | 0.041 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MLPHARE |
Refinement software | REFMAC |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 35.000 | 2.200 |
分解能 [Å] (高) | 2.100 | 2.100 |
Rmerge_l_obs | 0.076 * | 0.320 * |
独立反射数 | 16165 | |
<I/σ(I)> | 11 | 2.7 |
完全性 [%] | 99.0 | 99 |
冗長性 | 3.6 | 3 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | Vapor diffusion, hanging drop * | 8.5 * | 30 % (V/V) 2-PROPANOL, 20 % (V/V) GLYCEROL, 0.2 M CACL2, 0.1 M NA-ACETATE PH 4.6 |
文献の結晶化試薬
ID | 結晶ID | 溶液 | 試薬名 | 濃度 (単位) (単位) | 詳細 |
1 | 1 | reservoir | 2-propanol | 30 (%(v/v)) | |
2 | 1 | reservoir | glycerol | 20 (%(v/v)) | |
3 | 1 | reservoir | 0.2 (M) | ||
4 | 1 | reservoir | sodium acetate | 0.1 (M) | |
5 | 1 | drop | protain | 20 (mg/ml) | |
6 | 1 | drop | 0.6 (%(v/v)) | ||
7 | 1 | drop | Tris-HCl | 20 (mM) |