1OHF
The refined structure of Nudaurelia capensis omega virus
Experimental procedure
| 実験手法 | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | CHESS BEAMLINE A1 |
| Synchrotron site | CHESS |
| Beamline | A1 |
| Temperature [K] | 287 |
| Detector technology | FILM |
| Spacegroup name | P 1 |
| 格子定数 [Å] | 413.550, 410.220, 419.670 |
| 格子定数 [度] | 59.13, 58.90, 64.04 |
精密化法
| 残基 | 20.000 - 2.800 |
| R因子 | 0.219 |
| Rwork | 0.219 |
| R-free | 0.22200 * |
| Structure solution method | OTHER |
| 結合長の平均二乗偏差(RMSD) [Å] | 0.007 * |
| 結合角の平均二乗偏差(RMSD) [度] | 25.400 * |
| Data reduction software | PURDUE (DATA PROCESSING PACKAGE) |
| Data scaling software | PURDUE (DATA PROCESSING PACKAGE) |
| Phasing software | PURDUE (DATA PROCESSING PACKAGE) |
| Refinement software | CNS (1.1) |
Quality characteristics
| Overall | |
| 分解能 [Å] (低) | 20.000 |
| 分解能 [Å] (高) | 2.800 |
| Rmerge_l_obs | 0.121 |
| 独立反射数 | 2465275 |
| 完全性 [%] | 51.0 * |
結晶化条件
| 結晶ID | 方法 | pH | 温度 | 溶液条件 |
| 1 | Vapor diffusion, sitting drop * | 5 * | Cavarelli, J., (1998) Acta Crystallogr., B47, 23. * |
文献の結晶化試薬
| ID | 結晶ID | 溶液 | 試薬名 | 濃度 (単位) (単位) | 詳細 |
| 1 | 1 | reservoir | MOPS | 0.075 (M) | pH7.0 |
| 2 | 1 | reservoir | PEG8000 | 2 (%) | |
| 3 | 1 | reservoir | 0.25 (M) | ||
| 4 | 1 | reservoir | 0.001 (M) | ||
| 5 | 1 | drop | virus | 8-10 (mg/ml) | |
| 6 | 1 | drop | sodium acetate | 0.07 (M) | pH5.0 |
