1A1O
MHC CLASS I MOLECULE B*5301 COMPLEXED WITH PEPTIDE LS6 (KPIVQYDNF) FROM THE MALARIA PARASITE P. FALCIPARUM
Experimental procedure
Source type | SYNCHROTRON |
Source details | SRS BEAMLINE PX9.6 |
Synchrotron site | SRS |
Beamline | PX9.6 |
Temperature [K] | 287 |
Detector technology | IMAGE PLATE |
Collection date | 1996-02-09 |
Detector | MAR scanner 300 mm plate |
Spacegroup name | P 21 21 21 |
格子定数 [Å] | 51.300, 83.300, 112.400 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 15.000 - 2.300 |
R因子 | 0.168 |
Rwork | 0.168 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1hsa |
結合長の平均二乗偏差(RMSD) [Å] | 0.013 |
結合角の平均二乗偏差(RMSD) [度] | 26.800 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | X-PLOR (3.1) |
Refinement software | X-PLOR (3.1) |
Quality characteristics
Overall | |
分解能 [Å] (低) | 15.000 |
分解能 [Å] (高) | 2.300 |
Rmerge_l_obs | 0.090 |
独立反射数 | 27424 |
完全性 [%] | 97.1 |
冗長性 | 3.6 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | Vapor diffusion * | 6.5 | 21 * | 18% PEG8000 0.1M SODIUM CACODYLATE PH6.5 0.2M CALCIUM ACETATE |
文献の結晶化試薬
ID | 結晶ID | 溶液 | 試薬名 | 濃度 (単位) (単位) | 詳細 |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | reservoir | calcium acetate | 0.2 (M) | |
3 | 1 | reservoir | sodium cacodylate | 0.1 (M) | pH6.5 |
4 | 1 | reservoir | PEG8000 | 18 (%) |