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NMR 化学シフト データを含む全ての PDB エントリー
7D0Y
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BU of 7d0y by Molmil
NMR solution structures of the DNA minidumbbell formed by two CmCTG repeats at pH 5
分子名称: DNA (5'-D(*(DCZ)P*(5CM)P*TP*GP*CP*(5CM)P*TP*G)-3'), SODIUM ION
著者Wan, L, Guo, P, Lam, S.L.
登録日2020-09-12
公開日2021-02-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献5-Methylcytosine Substantially Enhances the Thermal Stability of DNA Minidumbbells.
Chemistry, 27, 2021
7D0Z
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BU of 7d0z by Molmil
NMR solution structures of the DNA minidumbbell formed by two CCTG repeats at pH 5
分子名称: DNA (5'-D(*(DCZ)P*CP*TP*GP*CP*CP*TP*G)-3'), SODIUM ION
著者Guo, P, Lam, S.L.
登録日2020-09-12
公開日2021-02-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献5-Methylcytosine Substantially Enhances the Thermal Stability of DNA Minidumbbells.
Chemistry, 27, 2021
7D11
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BU of 7d11 by Molmil
Solution structure of a WKRY DNA-binding domain
分子名称: WRKY transcription factor 1, ZINC ION
著者Li, Q.W, Hu, Y.F, Jin, C.W.
登録日2020-09-12
公開日2021-09-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of a WKRY DNA-binding domain
To Be Published
7D12
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BU of 7d12 by Molmil
NMR solution structures of CAG RNA-DB213 binding complex
分子名称: N'-{(Z)-amino[4-(amino{[3-(dimethylammonio)propyl]iminio}methyl)phenyl]methylidene}-N,N-dimethylpropane-1,3-diaminium, RNA (5'-R(*GP*CP*AP*GP*CP*AP*GP*CP*UP*UP*CP*GP*GP*CP*AP*GP*CP*AP*GP*C)-3'), SODIUM ION
著者Chan, H.Y.E, Guo, P.
登録日2020-09-12
公開日2021-05-12
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献CAG RNAs induce DNA damage and apoptosis by silencing NUDT16 expression in polyglutamine degeneration.
Proc.Natl.Acad.Sci.USA, 118, 2021
7D13
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NERP-2 in a HFIP solution
分子名称: Neurosecretory protein VGF
著者Park, O, Cheong, C, Jeon, Y.
登録日2020-09-13
公開日2020-11-11
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of neuroendocrine regulatory peptide-2 in membrane-mimicking environments.
Peptide Science, 2020
7D16
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NERP-2 in a DPC solution
分子名称: Neurosecretory protein VGF
著者Park, O, Cheong, C, Jeon, Y.
登録日2020-09-13
公開日2020-11-11
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of neuroendocrine regulatory peptide-2 in membrane-mimicking environments.
Peptide Science, 2020
7D2O
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BU of 7d2o by Molmil
Solution structure of Gaussia Luciferase by NMR
分子名称: Luciferase
著者Kobayashi, N, Wu, N, Kuroda, Y, Yamazaki, T.
登録日2020-09-17
公開日2020-12-02
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution structure of Gaussia Luciferase with five disulfide bonds and identification of a putative coelenterazine binding cavity by heteronuclear NMR.
Sci Rep, 10, 2020
7D37
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BU of 7d37 by Molmil
Solution structure of Acm2-precursor peptide of Heat-stable enterotoxin produced by Enterotoxigenic Escherichia coli
分子名称: CYS-CY1-GLU-LEU-CYS-CYS-ASN-PRO-ALA-CY1-THR-GLY-CYS
著者Shimamoto, S, Hidaka, Y.
登録日2020-09-18
公開日2020-12-16
実験手法SOLUTION NMR
主引用文献Topological Regulation of the Bioactive Conformation of a Disulfide-Rich Peptide, Heat-Stable Enterotoxin.
Molecules, 25, 2020
7D3V
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BU of 7d3v by Molmil
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
分子名称: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
著者Cao, C.Y, Liu, Y.P, Lan, W.X.
登録日2020-09-21
公開日2021-10-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3
To Be Published
7D3W
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BU of 7d3w by Molmil
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
分子名称: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
著者Cao, C, Liu, Y, Lan, W.
登録日2020-09-21
公開日2021-10-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Two different kinds of interaction modes of deaminase APOBEC3A with single-stranded DNA in solution detected by nuclear magnetic resonance.
Protein Sci., 31, 2022
7D3X
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Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
分子名称: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
著者Cao, C, Liu, Y.
登録日2020-09-21
公開日2021-10-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Two different kinds of interaction modes of deaminase APOBEC3A with single-stranded DNA in solution detected by nuclear magnetic resonance.
Protein Sci., 31, 2022
7D5F
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BU of 7d5f by Molmil
Left-handed G-quadruplex containing 3 bulges
分子名称: 3xBulge-LHG4motif
著者Winnerdy, F.R, Das, P, Ngo, K.H, Maity, A, Bakalar, B, Mechulam, Y, Schmitt, E, Phan, A.T.
登録日2020-09-25
公開日2021-02-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Bulges in left-handed G-quadruplexes.
Nucleic Acids Res., 49, 2021
7D8K
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Solution structure of the methyl-CpG binding domain of MBD6 from Arabidopsis thaliana
分子名称: Methyl-CpG-binding domain-containing protein 6
著者Mahana, Y, Ohki, I, Walinda, E, Morimoto, D, Sugase, K, Shirakawa, M.
登録日2020-10-08
公開日2021-10-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Insights into Methylated DNA Recognition by the Methyl-CpG Binding Domain of MBD6 from Arabidopsis thaliana .
Acs Omega, 7, 2022
7DAB
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BU of 7dab by Molmil
plant peptide hormone
分子名称: Maternally expressed gene14
著者Umetsu, Y, Ohki, S.
登録日2020-10-16
公開日2021-10-20
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献plant peptide hormone
To Be Published
7DAC
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Human RIPK3 amyloid fibril revealed by solid-state NMR
分子名称: Receptor-interacting serine/threonine-protein kinase 3
著者Wu, X.L, Zhang, J, Dong, X.Q, Liu, J, Li, B, Hu, H, Wang, J, Wang, H.Y, Lu, J.X.
登録日2020-10-16
公開日2021-04-28
最終更新日2024-05-01
実験手法SOLID-STATE NMR
主引用文献The structure of a minimum amyloid fibril core formed by necroptosis-mediating RHIM of human RIPK3.
Proc.Natl.Acad.Sci.USA, 118, 2021
7DCV
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BU of 7dcv by Molmil
Structure of the transmembrane domain of human PD-L1
分子名称: Programmed cell death 1 ligand 1
著者Maorong, W, Yunlei, C, Bo, O.Y.
登録日2020-10-27
公開日2022-08-31
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of the transmembrane domain of human PD-L1
Sci Adv, 2022
7DD4
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BU of 7dd4 by Molmil
Solution structure of an RNA derived from the joint region of the TAR and PolyA stems of HIV-1 genomic RNA
分子名称: RNA (36-MER)
著者Obayashi, C.M, Shinohara, Y, Masuda, T, Kawai, G.
登録日2020-10-27
公開日2021-06-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Influence of the 5'-terminal sequences on the 5'-UTR structure of HIV-1 genomic RNA.
Sci Rep, 11, 2021
7DEE
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BU of 7dee by Molmil
Structural Basis of the regulation of DISC Assembly by the interaction of c-FLIPs with Procaspase-8
分子名称: C8-H1a, CASP8 and FADD-like apoptosis regulator
著者Bai, Z.Q, Hu, K.F.
登録日2020-11-03
公開日2021-11-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Backbone and side-chain chemical shift assignments of a cellular FLICE-inhibitory protein (c-FLIPS)
Biomol NMR Assign, 14, 2020
7DEH
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BU of 7deh by Molmil
Solution structure of cecropin P1 in dodecylphosphocholine micelles
分子名称: Cecropin-P1
著者Gu, H, Kumeta, H, Aizawa, T.
登録日2020-11-04
公開日2021-11-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Three-Dimensional Structure of the Antimicrobial Peptide Cecropin P1 in Dodecylphosphocholine Micelles and the Role of the C-Terminal Residues
Acs Omega, 7, 2022
7DFE
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BU of 7dfe by Molmil
NMR structure of TuSp2-RP
分子名称: B6 protein
著者Lin, Z, Fan, T, Fan, J.
登録日2020-11-07
公開日2021-11-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献1H, 15N and 13C resonance assignments of a repetitive domain of tubuliform spidroin 2
Biomol.Nmr Assign., 15, 2021
7DHT
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BU of 7dht by Molmil
Solution structure of ATG8f of Arabidopsis thaliana
分子名称: Autophagy-related protein 8f
著者Lee, K.M, Sun, S.L, Wong, K.B.
登録日2020-11-17
公開日2021-12-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Mechanistic insights into an atypical interaction between ATG8 and SH3P2 in Arabidopsis thaliana.
Autophagy, 18, 2022
7DM4
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BU of 7dm4 by Molmil
Solution structure of ARID4B Tudor domain
分子名称: AT-rich interactive domain-containing protein 4B
著者Ren, J, Yao, H, Hu, W, Perrett, S, Feng, Y, Gong, W.
登録日2020-12-02
公開日2021-03-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis for the DNA-binding activity of human ARID4B Tudor domain.
J.Biol.Chem., 296, 2021
7DMD
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Solution structure of human Aha1 N-terminal domain
分子名称: Activator of 90 kDa heat shock protein ATPase homolog 1
著者Hu, H, Zhou, C, Zhang, N.
登録日2020-12-03
公開日2021-04-21
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Aha1 Exhibits Distinctive Dynamics Behavior and Chaperone-Like Activity.
Molecules, 26, 2021
7DME
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Solution structure of human Aha1
分子名称: Activator of 90 kDa heat shock protein ATPase homolog 1
著者Hu, H, Zhou, C, Zhang, N.
登録日2020-12-03
公開日2021-04-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Aha1 Exhibits Distinctive Dynamics Behavior and Chaperone-Like Activity.
Molecules, 26, 2021
7DO1
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Solution structure of a heteromolecular telomeric (3+1) G-quadruplex containing right loop progression
分子名称: DNA (5'-D(*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), DNA (5'-D(*TP*TP*AP*GP*GP*G)-3')
著者Fu, W.Q, Jing, H.T, Zhang, N.
登録日2020-12-11
公開日2021-09-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Two coexisting pseudo-mirror heteromolecular telomeric G-quadruplexes in opposite loop progressions differentially recognized by a low equivalent of Thioflavin T.
Nucleic Acids Res., 49, 2021

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