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NMR 化学シフト データを含む全ての PDB エントリー
6R8E
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SC14 G-hairpin
分子名称: DNA (5'-D(*GP*TP*GP*TP*GP*TP*GP*GP*GP*TP*GP*TP*GP*T)-3')
著者Lenarcic Zivkovic, M, Trantirek, L, Plavec, J.
登録日2019-04-01
公開日2021-02-03
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Insight into formation propensity of pseudocircular DNA G-hairpins.
Nucleic Acids Res., 49, 2021
6R8N
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BU of 6r8n by Molmil
STRUCTURE DETERMINATION OF THE TETRAHEDRAL AMINOPEPTIDASE TET2 FROM P. HORIKOSHII BY USE OF COMBINED SOLID-STATE NMR, SOLUTION-STATE NMR AND EM DATA 4.1 A, FOLLOWED BY REAL_SPACE_REFINEMENT AT 4.1 A
分子名称: Tetrahedral aminopeptidase, ZINC ION
著者Colletier, J.-P, Gauto, D, Estrozi, L, Favier, A, Effantin, G, Schoehn, G, Boisbouvier, J, Schanda, P.
登録日2019-04-02
公開日2019-08-14
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (4.1 Å), SOLUTION NMR
主引用文献Integrated NMR and cryo-EM atomic-resolution structure determination of a half-megadalton enzyme complex.
Nat Commun, 10, 2019
6R95
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The solution NMR structure of cis-dicarba-brevinin-1BYa in 33% trifluoroethanol
分子名称: Brevinin-1BYa
著者Timmons, P.B, O'Flynn, D.P, Conlon, J.M, Hewage, C.M.
登録日2019-04-02
公開日2019-09-25
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Insights into conformation and membrane interactions of the acyclic and dicarba-bridged brevinin-1BYa antimicrobial peptides.
Eur.Biophys.J., 48, 2019
6R96
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The solution NMR structure of cis-dicarba-brevinin-1BYa in sodium dodecyl sulphate micelles
分子名称: Brevinin-1BYa
著者Timmons, P.B, O'Flynn, D.P, Conlon, J.M, Hewage, C.M.
登録日2019-04-02
公開日2019-09-25
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Insights into conformation and membrane interactions of the acyclic and dicarba-bridged brevinin-1BYa antimicrobial peptides.
Eur.Biophys.J., 48, 2019
6R9K
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A quadruplex hybrid structure with lpp loop orientation and 3 syn residues
分子名称: DNA (25-MER)
著者Karg, B, Weisz, K.
登録日2019-04-03
公開日2019-07-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Duplex-Guided Refolding into Novel G-Quadruplex (3+1) Hybrid Conformations.
Angew.Chem.Int.Ed.Engl., 58, 2019
6R9L
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A quadruplex hybrid structure with lpp loop orientation and 5 syn residues
分子名称: DNA (25-MER)
著者Karg, B, Weisz, K.
登録日2019-04-03
公開日2019-07-03
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Duplex-Guided Refolding into Novel G-Quadruplex (3+1) Hybrid Conformations.
Angew.Chem.Int.Ed.Engl., 58, 2019
6R9Z
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3D NMR solution structure of ligand peptide (Ac)EVNPPVP of Pro-Pro endopeptidase-1
分子名称: ACE-GLU-VAL-ASN-PRO-PRO-VAL-PRO-NH2
著者Diaz, D.
登録日2019-04-04
公開日2019-06-19
最終更新日2019-08-07
実験手法SOLUTION NMR
主引用文献Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1.
J.Biol.Chem., 294, 2019
6RC7
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NMR structure of cytotoxin 3 from Naja kaouthia in solution, major form
分子名称: Cytotoxin 3
著者Dubinnyi, M.A, Dubovskii, P.V, Utkin, Y.N, Arseniev, A.S.
登録日2019-04-11
公開日2020-05-13
最終更新日2021-05-26
実験手法SOLUTION NMR
主引用文献The omega-loop of cobra cytotoxins tolerates multiple amino acid substitutions.
Biochem.Biophys.Res.Commun., 558, 2021
6RFM
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Bordetella pertussis adenylate cyclase toxin transmembrane segment 411-490 in DPC micelles
分子名称: Bifunctional hemolysin/adenylate cyclase
著者Masin, J, Bumba, L, Veverka, V.
登録日2019-04-15
公開日2020-05-13
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Negative charge of the AC-to-Hly linking segment modulates calcium-dependent membrane activities of Bordetella adenylate cyclase toxin.
Biochim Biophys Acta Biomembr, 1862, 2020
6RH5
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Solution structure and 1H, 13C and 15N chemical shift assignments for NECAP1 PHear domain
分子名称: Adaptin ear-binding coat-associated protein 1
著者Owen, D.J, Neuhaus, D, Yang, J.-C, Herrmann, T.
登録日2019-04-18
公開日2019-09-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Temporal Ordering in Endocytic Clathrin-Coated Vesicle Formation via AP2 Phosphorylation.
Dev.Cell, 50, 2019
6RH6
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Solution structure and 1H, 13C and 15N chemical shift assignments for the complex of NECAP1 PHear domain with phosphorylated AP2 mu2 148-163
分子名称: AP-2 complex subunit mu, Adaptin ear-binding coat-associated protein 1
著者Owen, D.J, Neuhaus, D, Yang, J.-C, Herrmann, T.
登録日2019-04-18
公開日2019-09-04
実験手法SOLUTION NMR
主引用文献Temporal Ordering in Endocytic Clathrin-Coated Vesicle Formation via AP2 Phosphorylation.
Dev.Cell, 50, 2019
6RHY
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Structure of pore-forming amyloid-beta tetramers
分子名称: Amyloid beta A4 protein
著者Bardiaux, B, Ciudad, S, Carulla, N.
登録日2019-04-23
公開日2019-09-25
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献A beta (1-42) tetramer and octamer structures reveal edge conductivity pores as a mechanism for membrane damage.
Nat Commun, 11, 2020
6RIO
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BU of 6rio by Molmil
Imidazole Polyamide-DNA complex NMR structure (5'-CGATGTACATCG-3')
分子名称: 3-[3-[[4-[[4-[[4-[[4-[[(2~{R})-2-azaniumyl-4-[[1-methyl-4-[[1-methyl-4-[[1-methyl-4-[(1-methylimidazol-2-yl)carbonylamino]pyrrol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]butanoyl]amino]-1-methyl-imidazol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]propanoylamino]propyl-dimethyl-azanium, DNA (5'-(*(DC5)P*GP*AP*TP*GP*TP*AP*CP*AP*TP*CP*(DG3))-3')
著者Padroni, G, Withers, J.M, Taladriz-Sender, A, Reichenbach, L.F, Parkinson, J.A, Burley, G.A.
登録日2019-04-24
公開日2019-06-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Sequence-Selective Minor Groove Recognition of a DNA Duplex Containing Synthetic Genetic Components.
J.Am.Chem.Soc., 141, 2019
6RK3
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Solution structure of the ribosome Elongation Factor P (EF-P) from Staphylococcus aureus
分子名称: Elongation factor P
著者Usachev, K, Fatkhullin, B, Gabdulkhakov, A, Khusainov, I, Golubev, A, Validov, S, Yusupova, G, Yusupov, M.
登録日2019-04-30
公開日2020-03-11
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR and crystallographic structural studies of the Elongation factor P from Staphylococcus aureus.
Eur.Biophys.J., 49, 2020
6RLS
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BU of 6rls by Molmil
Concerted dynamics of metallo-base pairs in an A/B-form helical transition (apo species)
分子名称: DNA (5'-D(*CP*GP*TP*CP*TP*CP*AP*TP*GP*AP*TP*AP*CP*G)-3')_apo
著者Schmidt, O.P, Jurt, S, Johannsen, S, Karimi, A, Sigel, R.K.O, Luedtke, N.W.
登録日2019-05-02
公開日2019-10-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Concerted dynamics of metallo-base pairs in an A/B-form helical transition.
Nat Commun, 10, 2019
6RPV
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Extremely stable monomeric variant of human cystatin C with single amino acid substitution
分子名称: Cystatin-C
著者Zhukov, I, Rodziewicz-Motowidlo, S, Maszota-Zieleniak, M, Jurczak, P, Kozak, M.
登録日2019-05-14
公開日2019-07-31
最終更新日2023-06-14
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献NMR and crystallographic structural studies of the extremely stable monomeric variant of human cystatin C with single amino acid substitution.
Febs J., 287, 2020
6RQS
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RW16 peptide
分子名称: ARG-ARG-TRP-ARG-ARG-TRP-TRP-ARG-ARG-TRP-TRP-ARG-ARG-TRP-ARG-ARG
著者Jobin, M.-L, Grelard, A, Alves, I, Mackereth, C.D.
登録日2019-05-16
公開日2019-10-23
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Biophysical Insight on the Membrane Insertion of an Arginine-Rich Cell-Penetrating Peptide.
Int J Mol Sci, 20, 2019
6RRL
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Solution NMR structure of the peptide 3967 from medicinal leech Hirudo medicinalis in dodecylphosphocholine micelles
分子名称: peptide 3967
著者Nadezhdin, K.D, Grafskaia, E.N, Arseniev, A.S, Lazarev, V.N.
登録日2019-05-20
公開日2019-07-24
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Medicinal leech antimicrobial peptides lacking toxicity represent a promising alternative strategy to combat antibiotic-resistant pathogens.
Eur.J.Med.Chem., 180, 2019
6RRO
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Solution NMR structure of the peptide 536_2 from medicinal leech Hirudo medicinalis in dodecylphosphocholine micelles
分子名称: peptide 536_2
著者Nadezhdin, K.D, Grafskaia, E.N, Arseniev, A.S, Lazarev, V.N.
登録日2019-05-20
公開日2019-07-24
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Medicinal leech antimicrobial peptides lacking toxicity represent a promising alternative strategy to combat antibiotic-resistant pathogens.
Eur.J.Med.Chem., 180, 2019
6RS3
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2'-F-riboguanosine modified G-quadruplex with V-loop
分子名称: F1415
著者Haase, L, Weisz, K.
登録日2019-05-21
公開日2019-11-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Sugar Puckering Drives G-Quadruplex Refolding: Implications for V-Shaped Loops.
Chemistry, 26, 2020
6RSF
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NMR structure of pleurocidin KR in SDS micelles
分子名称: Pleurocidin
著者Manzo, G, Mason, A.J.
登録日2019-05-21
公開日2020-12-09
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献A pleurocidin analogue with greater conformational flexibility, enhanced antimicrobial potency and in vivo therapeutic efficacy.
Commun Biol, 3, 2020
6RSG
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NMR structure of pleurocidin VA in SDS micelles
分子名称: Pleurocidin
著者Manzo, G, Mason, A.J.
登録日2019-05-21
公開日2020-12-09
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献A pleurocidin analogue with greater conformational flexibility, enhanced antimicrobial potency and in vivo therapeutic efficacy.
Commun Biol, 3, 2020
6RSM
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Solution NMR structure of the peptide 12530 from medicinal leech Hirudo medicinalis in dodecylphosphocholine micelles
分子名称: peptide 12530
著者Talyzina, I.A, Nadezhdin, K.D, Grafskaia, E.N, Arseniev, A.S, Lazarev, V.N.
登録日2019-05-21
公開日2019-07-24
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Medicinal leech antimicrobial peptides lacking toxicity represent a promising alternative strategy to combat antibiotic-resistant pathogens.
Eur.J.Med.Chem., 180, 2019
6RSS
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Solution structure of the fourth WW domain of WWP2 with GB1-tag
分子名称: NEDD4-like E3 ubiquitin-protein ligase WWP2
著者Wahl, L.C, Watt, J.E, Tolchard, J, Blumenschein, T.M.A, Chantry, A.
登録日2019-05-22
公開日2019-10-09
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Smad7 Binds Differently to Individual and Tandem WW3 and WW4 Domains of WWP2 Ubiquitin Ligase Isoforms.
Int J Mol Sci, 20, 2019
6RVA
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STRUCTURE OF [ASP58]-IGF-I ANALOGUE
分子名称: Insulin-like growth factor I
著者Jiracek, J, Zakova, L, Socha, O.
登録日2019-05-31
公開日2019-10-02
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Mutations at hypothetical binding site 2 in insulin and insulin-like growth factors 1 and 2 result in receptor- and hormone-specific responses.
J.Biol.Chem., 294, 2019

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