Pairwise fitting pdb-3j0f on pdb-3j7w by gmfit










Pairwise fitting of target pdb-3j0f on reference pdb-3j7w by gmfit(PID:2161402).





RANK[1] Corr.Coeff:0.420

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3j0f)

display:



color:



b'SINDBIS VIRION                                                        ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3j0f)]







REFERENCE(pdb-3j7w)

display:



color:


b'CAPSID EXPANSION MECHANISM OF BACTERIOPHAGE T7 REVEALED BY MULTI-STATE' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.420
0.304
0.299
0.295
0.288
0.286
0.280
0.269
0.268
0.264







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j7w"(PDB-format) or 
 "3j7w"(mmCIF-format), and read it.

  2.  Download the Target molecule "3j0f"(PDB-format) or
  "3j0f"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.179836,-0.126034,0.975589 150.368298 center 0,0,0 model #1
move 5.743403,17.892575,11.941687 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!