Pairwise fitting pdb-3j0f on pdb-3j40 by gmfit










Pairwise fitting of target pdb-3j0f on reference pdb-3j40 by gmfit(PID:3680402).





RANK[1] Corr.Coeff:0.366

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3j0f)

display:



color:



b'SINDBIS VIRION                                                        ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3j0f)]







REFERENCE(pdb-3j40)

display:



color:


b'VALIDATED NEAR-ATOMIC RESOLUTION STRUCTURE OF BACTERIOPHAGE EPSILON15 ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.366
0.328
0.322
0.294
0.293
0.292
0.283
0.281
0.281
0.277







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j40"(PDB-format) or 
 "3j40"(mmCIF-format), and read it.

  2.  Download the Target molecule "3j0f"(PDB-format) or
  "3j0f"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.294901,0.521989,0.800350 135.808416 center 0,0,0 model #1
move 87.068493,-337.565742,187.243556 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!