Pairwise fitting pdb-3j0f on pdb-3j0c by gmfit










Pairwise fitting of target pdb-3j0f on reference pdb-3j0c by gmfit(PID:4124707).





RANK[1] Corr.Coeff:0.904

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3j0f)

display:



color:



b'SINDBIS VIRION                                                        ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3j0f)]







REFERENCE(pdb-3j0c)

display:



color:


b'MODELS OF E1, E2 AND CP OF VENEZUELAN EQUINE ENCEPHALITIS VIRUS TC-83 ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.904
0.482
0.419
0.350
0.334
0.303
0.303
0.294
0.290
0.269







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j0c"(PDB-format) or 
 "3j0c"(mmCIF-format), and read it.

  2.  Download the Target molecule "3j0f"(PDB-format) or
  "3j0f"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.984815,-0.170699,0.031636 148.625600 center 0,0,0 model #1
move -5.527672,-5.015009,3.705735 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 3j0c)]

[Download the target GMM(pdb 3j0f)]

[Download gmfit result file(4124707)]