Pairwise fitting pdb-3izd on emdb-6166 by gmfit










Pairwise fitting of target pdb-3izd on reference emdb-6166 by gmfit(PID:4169913).





RANK[1] Corr.Coeff:0.302

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3izd)

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b'MODEL OF THE LARGE SUBUNIT RNA EXPANSION SEGMENT ES27L-OUT BASED ON A ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3izd)]







REFERENCE(emdb-6166)

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Essential Structural and Functional Roles of the Cmr4 Subunit in RNA Cleavage by the Cmr CRISPR-Cas Complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.302
0.290
0.228
0.221
0.217
0.215
0.202
0.186
0.136
0.128







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6166.map.gz", and read it.

  2.  Download the Target molecule "3izd"(PDB-format) or
  "3izd"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.731195,-0.470010,-0.494413 152.496174 center 0,0,0 model #1
move -67.443998,-55.918994,-73.850769 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 6166)]

[Download the target GMM(pdb 3izd)]

[Download gmfit result file(4169913)]