Pairwise fitting pdb-3gzu on pdb-4bml by gmfit



Pairwise fitting of target pdb-3gzu on reference pdb-4bml by gmfit(PID:1609789).

RANK[1] Corr.Coeff:0.455 [JSmol] [Molmil]
TARGET(pdb-3gzu)
display:
color:
b'VP7 RECOATED ROTAVIRUS DLP ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-3gzu)]
REFERENCE(pdb-4bml)
display:
color:
b'C-ALPHA BACKBONE TRACE OF MAJOR CAPSID PROTEIN GP39 FOUND IN MARINE ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.455 0.394 0.375 0.366 0.364 0.364 0.363 0.363 0.359 0.331

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4bml"(PDB-format) or "4bml"(mmCIF-format), and read it.
  2. Download the Target molecule "3gzu"(PDB-format) or "3gzu"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.511217,-0.514853,-0.688174 64.149211 center 0,0,0 model #1
    move -384.793843,-247.678154,50.464221 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!