Pairwise fitting pdb-3gzu on pdb-4an5 by gmfit










Pairwise fitting of target pdb-3gzu on reference pdb-4an5 by gmfit(PID:4109014).





RANK[1] Corr.Coeff:0.370

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3gzu)

display:



color:



b'VP7 RECOATED ROTAVIRUS DLP                                            ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3gzu)]







REFERENCE(pdb-4an5)

display:



color:


b'CAPSID STRUCTURE AND ITS STABILITY AT THE LATE STAGES OF BACTERIOPHAGE' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.370
0.327
0.315
0.305
0.304
0.301
0.300
0.287
0.285
0.278







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4an5"(PDB-format) or 
 "4an5"(mmCIF-format), and read it.

  2.  Download the Target molecule "3gzu"(PDB-format) or
  "3gzu"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.916130,0.360762,0.174806 172.514561 center 0,0,0 model #1
move 352.347450,354.892401,161.662969 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 4an5)]

[Download the target GMM(pdb 3gzu)]

[Download gmfit result file(4109014)]