Pairwise fitting pdb-3gzu on pdb-3j40 by gmfit










Pairwise fitting of target pdb-3gzu on reference pdb-3j40 by gmfit(PID:636176).





RANK[1] Corr.Coeff:0.452

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3gzu)

display:



color:



b'VP7 RECOATED ROTAVIRUS DLP                                            ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3gzu)]







REFERENCE(pdb-3j40)

display:



color:


b'VALIDATED NEAR-ATOMIC RESOLUTION STRUCTURE OF BACTERIOPHAGE EPSILON15 ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.452
0.448
0.438
0.429
0.428
0.419
0.408
0.407
0.402
0.401







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j40"(PDB-format) or 
 "3j40"(mmCIF-format), and read it.

  2.  Download the Target molecule "3gzu"(PDB-format) or
  "3gzu"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.095643,0.651839,0.752302 155.408313 center 0,0,0 model #1
move 46.675950,-276.752416,52.058839 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!