Pairwise fitting pdb-3gzu on pdb-1hb9 by gmfit



Pairwise fitting of target pdb-3gzu on reference pdb-1hb9 by gmfit(PID:3864323).

RANK[1] Corr.Coeff:0.555 [JSmol] [Molmil]
TARGET(pdb-3gzu)
display:
color:
b'VP7 RECOATED ROTAVIRUS DLP ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-3gzu)]
REFERENCE(pdb-1hb9)
display:
color:
b'QUASI-ATOMIC RESOLUTION MODEL OF BACTERIOPHAGE PRD1 WILD TYPE VIRION, ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.555 0.519 0.511 0.494 0.485 0.469 0.438 0.436 0.433 0.431

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "1hb9"(PDB-format) or "1hb9"(mmCIF-format), and read it.
  2. Download the Target molecule "3gzu"(PDB-format) or "3gzu"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.150336,-0.601634,0.784497 72.863299 center 0,0,0 model #1
    move 258.411064,-339.977072,152.653467 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!