Pairwise fitting pdb-3gzu on pdb-1gw7 by gmfit










Pairwise fitting of target pdb-3gzu on reference pdb-1gw7 by gmfit(PID:3252).





RANK[1] Corr.Coeff:0.551

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3gzu)

display:



color:



b'VP7 RECOATED ROTAVIRUS DLP                                            ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3gzu)]







REFERENCE(pdb-1gw7)

display:



color:


b'QUASI-ATOMIC RESOLUTION MODEL OF BACTERIOPHAGE PRD1 CAPSID, OBTAINED  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.551
0.511
0.488
0.486
0.479
0.471
0.470
0.444
0.439
0.438







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1gw7"(PDB-format) or 
 "1gw7"(mmCIF-format), and read it.

  2.  Download the Target molecule "3gzu"(PDB-format) or
  "3gzu"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.149470,-0.606874,0.780617 73.040629 center 0,0,0 model #1
move 259.000964,-333.588346,154.014359 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 1gw7)]

[Download the target GMM(pdb 3gzu)]

[Download gmfit result file(3252)]