Pairwise fitting pdb-3gzu on emdb-6118 by gmfit



Pairwise fitting of target pdb-3gzu on reference emdb-6118 by gmfit(PID:1633329).

RANK[1] Corr.Coeff:0.131 [JSmol] [Molmil]
TARGET(pdb-3gzu)
display:
color:
b'VP7 RECOATED ROTAVIRUS DLP ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-3gzu)]
REFERENCE(emdb-6118)
display:
color:
Electron cryo-microscopy of human papillomavirus 16 and H16.V5 Fab fragments [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.131 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_6118.map.gz", and read it.
  2. Download the Target molecule "3gzu"(PDB-format) or "3gzu"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.440660,-0.007046,0.897646 88.754292 center 0,0,0 model #1
    move 92.414410,18.977112,-521.754546 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!