Pairwise fitting pdb-3gzu on emdb-5678 by gmfit










Pairwise fitting of target pdb-3gzu on reference emdb-5678 by gmfit(PID:4090503).





RANK[1] Corr.Coeff:0.008

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3gzu)

display:



color:



b'VP7 RECOATED ROTAVIRUS DLP                                            ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3gzu)]







REFERENCE(emdb-5678)

display:



color:


Validated Near-Atomic Resolution Structure of Bacteriophage Epsilon15 Derived from Cryo-EM and Modeling [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.008
0.008
0.008
0.008
0.008
0.008
0.008
0.008
0.008
0.008







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5678.map.gz", and read it.

  2.  Download the Target molecule "3gzu"(PDB-format) or
  "3gzu"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.737125,0.606767,-0.297457 171.575783 center 0,0,0 model #1
move -150.038116,48.647165,238.096825 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5678)]

[Download the target GMM(pdb 3gzu)]

[Download gmfit result file(4090503)]