Pairwise fitting pdb-3gzu on emdb-3175 by gmfit










Pairwise fitting of target pdb-3gzu on reference emdb-3175 by gmfit(PID:612347).





RANK[1] Corr.Coeff:0.013

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3gzu)

display:



color:



b'VP7 RECOATED ROTAVIRUS DLP                                            ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3gzu)]







REFERENCE(emdb-3175)

display:



color:


P22 bacteriophage GFP-loaded Expanded Capsid [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.013
0.013
0.013
0.013
0.013
0.013
0.013
0.013
0.013
0.013







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3175.map.gz", and read it.

  2.  Download the Target molecule "3gzu"(PDB-format) or
  "3gzu"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.067213,-0.890256,0.450473 72.715685 center 0,0,0 model #1
move 596.009303,228.879592,276.851894 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!