Pairwise fitting pdb-3gzu on emdb-1124 by gmfit










Pairwise fitting of target pdb-3gzu on reference emdb-1124 by gmfit(PID:3586053).





RANK[1] Corr.Coeff:0.020

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3gzu)

display:



color:



b'VP7 RECOATED ROTAVIRUS DLP                                            ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3gzu)]







REFERENCE(emdb-1124)

display:



color:


Membrane proteins modulate the bilayer curvature in the bacterial virus Bam35. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.020
0.016
0.015
0.001
0.001
0.001
0.001
0.001
0.001
0.001







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1124.map.gz", and read it.

  2.  Download the Target molecule "3gzu"(PDB-format) or
  "3gzu"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.763526,0.534280,0.362730 173.909743 center 0,0,0 model #1
move 621.126669,551.809820,438.031171 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!