Pairwise fitting pdb-2zz9 on pdb-5gqh by gmfit










Pairwise fitting of target pdb-2zz9 on reference pdb-5gqh by gmfit(PID:16493).





RANK[1] Corr.Coeff:0.409

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-2zz9)

display:



color:



b'STRUCTURE OF AQUAPORIN-4 S180D MUTANT AT 2.8 A RESOLUTION BY ELECTRON ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-2zz9)]







REFERENCE(pdb-5gqh)

display:



color:


b'CRYO-EM STRUCTURE OF PAECAS3-ACRF3 COMPLEX                            ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.409
0.391
0.366
0.364
0.354
0.344
0.339
0.320
0.318
0.315







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5gqh"(PDB-format) or 
 "5gqh"(mmCIF-format), and read it.

  2.  Download the Target molecule "2zz9"(PDB-format) or
  "2zz9"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.557081,0.826804,-0.077822 107.777838 center 0,0,0 model #1
move -123.292570,44.116490,32.076168 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 5gqh)]

[Download the target GMM(pdb 2zz9)]

[Download gmfit result file(16493)]