Pairwise fitting pdb-1p58 on pdb-5ire by gmfit



Pairwise fitting of target pdb-1p58 on reference pdb-5ire by gmfit(PID:1115683).

RANK[1] Corr.Coeff:0.863 [JSmol] [Molmil]
TARGET(pdb-1p58)
display:
color:
b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]
[Download superimposed target atoms (PDB)(pdb-1p58)]
REFERENCE(pdb-5ire)
display:
color:
b'THE CRYO-EM STRUCTURE OF ZIKA VIRUS ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.863 0.522 0.509 0.459 0.432 0.412 0.382 0.380 0.364 0.355

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "5ire"(PDB-format) or "5ire"(mmCIF-format), and read it.
  2. Download the Target molecule "1p58"(PDB-format) or "1p58"(mmCIF-format), and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.862918,-0.449057,-0.231775 129.277209 center 0,0,0 model #1
    move 0.214604,3.008078,8.368589 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!