Pairwise fitting pdb-1p58 on pdb-5fua by gmfit










Pairwise fitting of target pdb-1p58 on reference pdb-5fua by gmfit(PID:195497).





RANK[1] Corr.Coeff:0.593

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1p58)

display:



color:



b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1p58)]







REFERENCE(pdb-5fua)

display:



color:


b'CRYO-EM OF BK POLYOMAVIRUS                                            ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.593
0.553
0.549
0.541
0.503
0.459
0.444
0.442
0.438
0.389







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5fua"(PDB-format) or 
 "5fua"(mmCIF-format), and read it.

  2.  Download the Target molecule "1p58"(PDB-format) or
  "1p58"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.833384,-0.552625,0.008761 151.606256 center 0,0,0 model #1
move 20.656103,173.203757,379.255074 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!