Pairwise fitting pdb-1p58 on pdb-3j6u by gmfit










Pairwise fitting of target pdb-1p58 on reference pdb-3j6u by gmfit(PID:522671).





RANK[1] Corr.Coeff:0.572

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1p58)

display:



color:



b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1p58)]







REFERENCE(pdb-3j6u)

display:



color:


b'CRYO-EM STRUCTURE OF DENGUE VIRUS SEROTYPE 3 IN COMPLEX WITH HUMAN    ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.572
0.491
0.483
0.472
0.456
0.453
0.429
0.423
0.315
0.306







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j6u"(PDB-format) or 
 "3j6u"(mmCIF-format), and read it.

  2.  Download the Target molecule "1p58"(PDB-format) or
  "1p58"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.341978,0.936952,-0.071918 169.588748 center 0,0,0 model #1
move -110.877002,-67.676491,81.328635 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!