Pairwise fitting pdb-1p58 on pdb-1tge by gmfit










Pairwise fitting of target pdb-1p58 on reference pdb-1tge by gmfit(PID:3713030).





RANK[1] Corr.Coeff:0.338

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1p58)

display:



color:



b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1p58)]







REFERENCE(pdb-1tge)

display:



color:


b'THE STRUCTURE OF IMMATURE DENGUE VIRUS AT 12.5 ANGSTROM               ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.338
0.316
0.271
0.270
0.268
0.265
0.229
0.207
0.203
0.191







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1tge"(PDB-format) or 
 "1tge"(mmCIF-format), and read it.

  2.  Download the Target molecule "1p58"(PDB-format) or
  "1p58"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.354730,-0.654702,0.667481 91.155734 center 0,0,0 model #1
move 222.743427,-30.366027,90.516191 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!