Pairwise fitting pdb-1p58 on emdb-3283 by gmfit










Pairwise fitting of target pdb-1p58 on reference emdb-3283 by gmfit(PID:875072).





RANK[1] Corr.Coeff:0.120

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1p58)

display:



color:



b'COMPLEX ORGANIZATION OF DENGUE VIRUS MEMBRANE PROTEINS AS REVEALED BY ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1p58)]







REFERENCE(emdb-3283)

display:



color:


Cryo-EM structure of BK polyomavirus [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.120
0.071
0.068
0.068
0.068
0.067
0.066
0.000
0.000
0.000







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3283.map.gz", and read it.

  2.  Download the Target molecule "1p58"(PDB-format) or
  "1p58"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.037242,0.039065,0.998542 54.950039 center 0,0,0 model #1
move -61.367922,-38.880560,-412.574052 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!