Pairwise fitting pdb-1k4r on pdb-5fua by gmfit










Pairwise fitting of target pdb-1k4r on reference pdb-5fua by gmfit(PID:3194649).





RANK[1] Corr.Coeff:0.503

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1k4r)

display:



color:



b'STRUCTURE OF DENGUE VIRUS                                             ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1k4r)]







REFERENCE(pdb-5fua)

display:



color:


b'CRYO-EM OF BK POLYOMAVIRUS                                            ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.503
0.457
0.447
0.429
0.418
0.411
0.372
0.370
0.342
0.298







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5fua"(PDB-format) or 
 "5fua"(mmCIF-format), and read it.

  2.  Download the Target molecule "1k4r"(PDB-format) or
  "1k4r"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.805586,-0.536210,-0.252011 141.222228 center 0,0,0 model #1
move 132.546774,154.514198,370.063395 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!