Pairwise fitting pdb-1k4r on pdb-4uif by gmfit










Pairwise fitting of target pdb-1k4r on reference pdb-4uif by gmfit(PID:4026005).





RANK[1] Corr.Coeff:0.641

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1k4r)

display:



color:



b'STRUCTURE OF DENGUE VIRUS                                             ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1k4r)]







REFERENCE(pdb-4uif)

display:



color:


b'CRYO-EM STRUCTURE OF DENGUE VIRUS SEROTYPE 2 IN COMPLEX WITH ANTIGEN- ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.641
0.434
0.430
0.393
0.375
0.349
0.347
0.317
0.257
0.246







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4uif"(PDB-format) or 
 "4uif"(mmCIF-format), and read it.

  2.  Download the Target molecule "1k4r"(PDB-format) or
  "1k4r"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.854721,-0.463676,-0.233358 129.761328 center 0,0,0 model #1
move 9.333330,8.718510,18.656547 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!