Pairwise fitting pdb-1k4r on pdb-3izg by gmfit










Pairwise fitting of target pdb-1k4r on reference pdb-3izg by gmfit(PID:2889362).





RANK[1] Corr.Coeff:0.536

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1k4r)

display:



color:



b'STRUCTURE OF DENGUE VIRUS                                             ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1k4r)]







REFERENCE(pdb-3izg)

display:



color:


b'BACTERIOPHAGE T7 PROHEAD SHELL EM-DERIVED ATOMIC MODEL                ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.536
0.472
0.470
0.467
0.411
0.380
0.305
0.297
0.278
0.263







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3izg"(PDB-format) or 
 "3izg"(mmCIF-format), and read it.

  2.  Download the Target molecule "1k4r"(PDB-format) or
  "1k4r"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.319049,-0.152270,-0.935426 118.413796 center 0,0,0 model #1
move -28.386768,-18.726369,20.880445 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!