Pairwise fitting pdb-1k4r on emdb-2141 by gmfit










Pairwise fitting of target pdb-1k4r on reference emdb-2141 by gmfit(PID:3663568).





RANK[1] Corr.Coeff:0.017

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1k4r)

display:



color:



b'STRUCTURE OF DENGUE VIRUS                                             ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1k4r)]







REFERENCE(emdb-2141)

display:



color:


6A Electron cryomicroscopy structure of immature Dengue virus serotype 1 [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.017
0.017
0.017
0.017
0.017
0.017
0.017
0.017
0.016
0.016







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2141.map.gz", and read it.

  2.  Download the Target molecule "1k4r"(PDB-format) or
  "1k4r"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.110898,-0.336194,0.935241 162.612491 center 0,0,0 model #1
move 88.180947,102.232735,-186.732698 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!