Pairwise fitting emdb-5372 on pdb-5wtf by gmfit










Pairwise fitting of target emdb-5372 on reference pdb-5wtf by gmfit(PID:3531134).





RANK[1] Corr.Coeff:0.099

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5372)

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color:



Structural transitions in RCNMV revealing potential mechanism of RNA release (EGTA map) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5372)]







REFERENCE(pdb-5wtf)

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color:


b'CRYO-EM STRUCTURE FOR HEPATITIS A VIRUS EMPTY PARTICLE                ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.099
0.076
0.073
0.071
0.065
0.046
0.045
0.044
0.016
0.012







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5wtf"(PDB-format) or 
 "5wtf"(mmCIF-format), and read it.

  2.  Download the Target map "emd_5372.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.155379,0.494915,-0.854937 131.005768 center 0,0,0 model #1
move -56.298523,-108.057814,151.895125 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!