Pairwise fitting emdb-5372 on emdb-6687 by gmfit










Pairwise fitting of target emdb-5372 on reference emdb-6687 by gmfit(PID:75333).





RANK[1] Corr.Coeff:0.784

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5372)

display:



color:



Structural transitions in RCNMV revealing potential mechanism of RNA release (EGTA map) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5372)]







REFERENCE(emdb-6687)

display:



color:


Cryo-EM structure for Hepatitis A virus empty particle [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.784
0.781
0.780
0.779
0.777
0.777
0.776
0.772
0.772
0.771







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6687.map.gz", and read it.

  2.  Download the Target map "emd_5372.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.147017,-0.907934,0.392482 100.273929 center 0,0,0 model #1
move -1.472944,1.748360,-1.087781 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!