Pairwise fitting emdb-5372 on emdb-2107 by gmfit










Pairwise fitting of target emdb-5372 on reference emdb-2107 by gmfit(PID:3985098).





RANK[1] Corr.Coeff:0.825

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5372)

display:



color:



Structural transitions in RCNMV revealing potential mechanism of RNA release (EGTA map) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5372)]







REFERENCE(emdb-2107)

display:



color:


HRV2 full native capsid [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.825
0.824
0.821
0.815
0.814
0.813
0.813
0.811
0.810
0.810







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2107.map.gz", and read it.

  2.  Download the Target map "emd_5372.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.817231,0.318957,0.480001 174.381301 center 0,0,0 model #1
move 229.999000,228.997309,231.695406 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!